ms2pip.spectrum_input
Read MS2 spectra.
- ms2pip.spectrum_input.read_mgf(spectrum_file)[source]
Read MS2 spectra from MGF file.
- Parameters:
spectrum_file (str) – Path to MGF file.
- Return type:
Generator[ObservedSpectrum, None, None]
- ms2pip.spectrum_input.read_mzml(spectrum_file)[source]
Read MS2 spectra from mzML file.
- Parameters:
spectrum_file (str) – Path to mzML file.
- Return type:
Generator[ObservedSpectrum, None, None]
- ms2pip.spectrum_input.read_tdf(spectrum_file)[source]
Read MS2 DDA spectra from .d folder.
- Parameters:
spectrum_file (str) – Path to .d folder.
- Return type:
Generator[ObservedSpectrum, None, None]
- ms2pip.spectrum_input.read_spectrum_file(spectrum_file)[source]
Read MS2 spectra from MGF or mzML file or .d folder; inferring the type from the filename extension.
- Parameters:
spectrum_file (str) – Path to MGF or mzML file.
- Return type:
Generator[ObservedSpectrum, None, None]